Welcome to epmc-tools’s documentation!

epmc-tools is a Python package that provides a powerful command-line interface (epmc-cli) and library for interacting with scientific literature. It allows you to:

• Process JATS XML from local files or URLs, converting them to JSON.

• Extract accession numbers from text.

• Split text into sentences.

• Access the Europe PMC APIs for searching articles, grants, and annotations.

• Harvest metadata via the OAI-PMH service.

Contents:

• Installation
  • Dependencies
  • Editable Mode
• Command-Line Interface
  • Usage
  • Options
  • Commands
  • Local Commands
  • extract-accessions-resources
  • Articles API
  • Annotations API
  • Grants API
  • OAI Service
• Using as a Library
  • Key Components
  • Example Script
  • How to Run the Example
• API Reference
  • API Clients
  • JATS Processor
  • Accession Number and Resource Extractor

Indices and tables

• Index

• Module Index

• Search Page